Browse entries in the PDBbind-CN Database

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Related entries of code: 1b8o
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1a9qRCSB PDB    PDBbind282aa, >1A9Q_1|Chain... at 99%
1b8nRCSB PDB    PDBbind284aa, >1B8N_1|Chain... at 99%
1lv8RCSB PDB    PDBbind289aa, >1LV8_1|Chains... *
1lvuRCSB PDB    PDBbind289aa, >1LVU_1|Chains... at 100%
1v48RCSB PDB    PDBbind289aa, >1V48_1|Chain... at 99%
1vfnRCSB PDB    PDBbind281aa, >1VFN_1|Chain... at 100%
3fucRCSB PDB    PDBbind284aa, >3FUC_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1g2oRCSB PDB    PDBbindIMH
1nw4RCSB PDB    PDBbindIMH
1pf7RCSB PDB    PDBbindIMH
1rr6RCSB PDB    PDBbindIMH
1rt9RCSB PDB    PDBbindIMH
2ff1RCSB PDB    PDBbindIMH
2ff2RCSB PDB    PDBbindIMH
2oc4RCSB PDB    PDBbindIMH
2oc9RCSB PDB    PDBbindIMH
2on6RCSB PDB    PDBbindIMH
2q7oRCSB PDB    PDBbindIMH
3b9gRCSB PDB    PDBbindIMH

Entry Information
PDB ID1b8o
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namepurine nucleoside phosphorylase
Ligand NameIMH
EC.Number E.C.2.4.2.1
Resolution 1.5(Å)
Affinity (Kd/Ki/IC50)Ki=23pM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v40 pp. 853-60, 2001
Ligand Properties
Formula C11H15N4O4
Molecular Weight 267.261
Exact Mass 267.109
No. of atoms 34
No. of bonds 36
Polar Surface Area 138.84
LOGP Value -2.30      (Computed with XLOGP3)
-1.48      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P55859  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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