Browse entries in the PDBbind-CN Database

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Related entries of code: 1d6v
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1axsRCSB PDB    PDBbind211aa, >1AXS_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1axsRCSB PDB    PDBbindHOP

Entry Information
PDB ID1d6v
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namechimeric germline precursor of oxy-cope
Ligand NameHOP
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=670nM
Release Year2000
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v39 pp. 627-32, 2000
Ligand Properties
Formula C23H27NO4
Molecular Weight 381.465
Exact Mass 381.194
No. of atoms 55
No. of bonds 57
Polar Surface Area 86.63
LOGP Value 4.71      (Computed with XLOGP3)
4.08      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P01834  P01857  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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