Browse entries in the PDBbind-CN Database

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Related entries of code: 1l6m
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3fw4RCSB PDB    PDBbind178aa, >3FW4_1|Chains... at 100%
3tf6RCSB PDB    PDBbind179aa, >3TF6_1|Chains... at 99%
3u0dRCSB PDB    PDBbind198aa, >3U0D_1|Chains... *
4k19RCSB PDB    PDBbind180aa, >4K19_1|Chains... at 98%
6qmuRCSB PDB    PDBbind188aa, >6QMU_1|Chains... at 92%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3tf6RCSB PDB    PDBbindDBH
3u0dRCSB PDB    PDBbindDBH

Entry Information
PDB ID1l6m
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameneutrophil gelatinase-associated lipocalin
Ligand NameDBH
EC.Number E.C.-.-.-.-
Resolution 2.4(Å)
Affinity (Kd/Ki/IC50)Kd=7.9nM
Release Year2003
Protein/NA SequenceCheck fasta file
Primary Reference Mol. Cell v10 pp. 1033-43, 2002
Ligand Properties
Formula C7H6O4
Molecular Weight 154.120
Exact Mass 154.027
No. of atoms 17
No. of bonds 17
Polar Surface Area 77.76
LOGP Value 2.37      (Computed with XLOGP3)
0.80      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P80188  
Entrez Gene IDNCBI Entrez Gene ID: 3934  
ASDInformation of known allosteric effects of PDB entries

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