Browse entries in the PDBbind-CN Database

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Related entries of code: 1ld8
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1fppRCSB PDB    PDBbind377aa, >1FPP_2|Chain... at 92%
1ld7RCSB PDB    PDBbind382aa, >1LD7_1|Chain... *
1mzcRCSB PDB    PDBbind382aa, >1MZC_1|Chain... at 100%
1n94RCSB PDB    PDBbind315aa, >1N94_1|Chain... at 95%
1n95RCSB PDB    PDBbind315aa, >1N95_1|Chain... at 96%
1n9aRCSB PDB    PDBbind315aa, >1N9A_1|Chain... at 96%
1ni1RCSB PDB    PDBbind315aa, >1NI1_1|Chain... at 96%
1nl4RCSB PDB    PDBbind312aa, >1NL4_1|Chain... at 96%
1o1sRCSB PDB    PDBbind380aa, >1O1S_1|Chain... at 92%
1o5mRCSB PDB    PDBbind377aa, >1O5M_1|Chain... at 93%
1qbqRCSB PDB    PDBbind333aa, >1QBQ_1|Chain... at 94%
1s63RCSB PDB    PDBbind382aa, >1S63_1|Chain... at 100%
1x81RCSB PDB    PDBbind315aa, >1X81_1|Chain... at 95%
2bedRCSB PDB    PDBbind313aa, >2BED_1|Chain... at 96%
2r2lRCSB PDB    PDBbind315aa, >2R2L_1|Chain... at 96%
2zirRCSB PDB    PDBbind377aa, >2ZIR_1|Chain... at 93%
2zisRCSB PDB    PDBbind377aa, >2ZIS_1|Chain... at 93%
3e37RCSB PDB    PDBbind379aa, >3E37_1|Chain... at 100%
3eu5RCSB PDB    PDBbind377aa, >3EU5_1|Chain... at 92%
3kslRCSB PDB    PDBbind377aa, >3KSL_1|Chain... at 93%
3ksqRCSB PDB    PDBbind377aa, >3KSQ_1|Chain... at 93%
3pz4RCSB PDB    PDBbind379aa, >3PZ4_1|Chain... at 92%
4gtmRCSB PDB    PDBbind377aa, >4GTM_1|Chain... at 92%
4gtoRCSB PDB    PDBbind377aa, >4GTO_1|Chain... at 92%
4gtpRCSB PDB    PDBbind377aa, >4GTP_1|Chain... at 92%
4gtqRCSB PDB    PDBbind377aa, >4GTQ_1|Chain... at 92%
4gtrRCSB PDB    PDBbind377aa, >4GTR_1|Chain... at 92%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1ld8
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namefarnesyltransferase alpha subunit
Ligand NameU49
EC.Number E.C.
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)IC50=3.5nM
Release Year2002
Protein/NA SequenceCheck fasta file
Primary Reference J.Med.Chem. v45 pp. 2388-409, 2002
Ligand Properties
Formula C26H22N5O2
Molecular Weight 436.485
Exact Mass 436.177
No. of atoms 55
No. of bonds 60
Polar Surface Area 87.76
LOGP Value 2.84      (Computed with XLOGP3)
4.57      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P49354  P49356  
Entrez Gene IDNCBI Entrez Gene ID: 2339  100529261  2342  
ASDInformation of known allosteric effects of PDB entries