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Related entries of code: 1trd
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1iigRCSB PDB    PDBbind250aa, >1IIG_1|Chains... *
1iihRCSB PDB    PDBbind250aa, >1IIH_1|Chains... at 100%
1kv5RCSB PDB    PDBbind250aa, >1KV5_1|Chains... at 99%
1ml1RCSB PDB    PDBbind243aa, >1ML1_1|Chains... at 95%
1tsiRCSB PDB    PDBbind250aa, >1TSI_1|Chains... at 99%
2j27RCSB PDB    PDBbind250aa, >2J27_1|Chains... at 99%
2v2cRCSB PDB    PDBbind250aa, >2V2C_1|Chain... at 99%
2v2hRCSB PDB    PDBbind242aa, >2V2H_1|Chains... at 95%
4timRCSB PDB    PDBbind250aa, >4TIM_1|Chains... at 100%
6timRCSB PDB    PDBbind250aa, >6TIM_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1b57RCSB PDB    PDBbindPGH
1ik4RCSB PDB    PDBbindPGH
1tpwRCSB PDB    PDBbindPGH
2isvRCSB PDB    PDBbindPGH
2iswRCSB PDB    PDBbindPGH
2vxnRCSB PDB    PDBbindPGH
3c52RCSB PDB    PDBbindPGH
3taoRCSB PDB    PDBbindPGH
4delRCSB PDB    PDBbindPGH

Entry Information
PDB ID1trd
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nametriosephosphate isomerase
Ligand NamePGH
EC.Number E.C.5.3.1.1
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Ki=4uM
Release Year1993
Protein/NA SequenceCheck fasta file
Primary Reference Proteins v16 pp. 311-26, 1993
Ligand Properties
Formula C2H7NO6P
Molecular Weight 172.054
Exact Mass 172.001
No. of atoms 17
No. of bonds 16
Polar Surface Area 132.84
LOGP Value -2.86      (Computed with XLOGP3)
-1.45      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P04789  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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