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Related entries of code: 1wdy
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4g8lRCSB PDB    PDBbind337aa, >4G8L_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4g8lRCSB PDB    PDBbind25A

Entry Information
PDB ID1wdy
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameinterferon-induced endoribonuclease, ribonuclease L
Ligand Name25A
EC.Number E.C.3.1.26.-
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)IC50=13nM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary Reference (2000) Bioorg. Med. Chem. Lett., Vol.10, pp.1357-1360
Ligand Properties
Formula C30H40N15O18P3
Molecular Weight 991.650
Exact Mass 991.189
No. of atoms 106
No. of bonds 114
Polar Surface Area 532.49
LOGP Value -8.44      (Computed with XLOGP3)
-2.34      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 19
No. of Rotatable Bonds: 19
No. of Nitrogen and Oxygen Atoms: 33
No. of Rings: 9
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q05823  
Entrez Gene IDNCBI Entrez Gene ID: 6041  
ASDInformation of known allosteric effects of PDB entries

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