Browse entries in the PDBbind-CN Database

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Related entries of code: 1xk5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2p8qRCSB PDB    PDBbind40aa, >2P8Q_2|Chain... at 100%
2q5dRCSB PDB    PDBbind40aa, >2Q5D_2|Chains... at 100%
2qnaRCSB PDB    PDBbind66aa, >2QNA_2|Chain... at 100%
3gb8RCSB PDB    PDBbind329aa, >3GB8_2|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1xk5
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namesnurportin-1
Ligand NameTPG
EC.Number E.C.-.-.-.-
Resolution 2.4(Å)
Affinity (Kd/Ki/IC50)Kd=1.0uM
Release Year2005
Protein/NA SequenceCheck fasta file
Primary Reference Embo J. v24 pp. 2235-43, 2005
Ligand Properties
Formula C23H37N10O18P3
Molecular Weight 834.517
Exact Mass 834.150
No. of atoms 91
No. of bonds 96
Polar Surface Area 446.89
LOGP Value -8.39      (Computed with XLOGP3)
-4.00      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 13
No. of Rotatable Bonds: 17
No. of Nitrogen and Oxygen Atoms: 28
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O95149  
Entrez Gene IDNCBI Entrez Gene ID: 10073  
ASDInformation of known allosteric effects of PDB entries

 
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