Browse entries in the PDBbind-CN Database

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Related entries of code: 1b2i
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1cebRCSB PDB    PDBbindAMH
6nmbRCSB PDB    PDBbindAMH

Entry Information
PDB ID1b2i
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namekringle 2 (K2) domain of human plasminogen (Pgn)
Ligand NameAMH
EC.Number E.C.
Resolution NMR
Affinity (Kd/Ki/IC50)IC50=3.1uM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference (2013) J. Med. Chem., Vol.56, pp.3273-3280
Ligand Properties
Formula C8H16NO2
Molecular Weight 158.218
Exact Mass 158.118
No. of atoms 27
No. of bonds 27
Polar Surface Area 64.94
LOGP Value -0.80      (Computed with XLOGP3)
0.12      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00747  
Entrez Gene IDNCBI Entrez Gene ID: 5340  
ASDInformation of known allosteric effects of PDB entries

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