Browse entries in the PDBbind-CN Database

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Related entries of code: 1c12
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3g5vRCSB PDB    PDBbind212aa, >3G5V_1|Chain... at 95%
3g5yRCSB PDB    PDBbind213aa, >3G5Y_1|Chain... at 92%
3nifRCSB PDB    PDBbind214aa, >3NIF_4|Chains... at 94%
4z7nRCSB PDB    PDBbind214aa, >4Z7N_4|Chains... at 94%
4z7oRCSB PDB    PDBbind214aa, >4Z7O_4|Chains... at 94%
4z7qRCSB PDB    PDBbind214aa, >4Z7Q_4|Chains... at 94%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1c12
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameantibody fab fragment
Ligand NameTRZ
EC.Number E.C.-.-.-.-
Resolution 2.6(Å)
Affinity (Kd/Ki/IC50)Kd=1.9nM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference J.Mol.Biol. v292 pp. 855-69, 1999
Ligand Properties
Formula C20H28O3
Molecular Weight 316.435
Exact Mass 316.204
No. of atoms 51
No. of bonds 52
Polar Surface Area 54.37
LOGP Value 5.93      (Computed with XLOGP3)
4.71      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P01869  P01837  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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