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Related entries of code: 1x07
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2e98RCSB PDB    PDBbind253aa, >2E98_1|Chains... at 100%
2e99RCSB PDB    PDBbind253aa, >2E99_1|Chains... at 100%
2e9aRCSB PDB    PDBbind253aa, >2E9A_1|Chains... at 100%
2e9cRCSB PDB    PDBbind253aa, >2E9C_1|Chains... at 100%
2e9dRCSB PDB    PDBbind253aa, >2E9D_1|Chains... at 100%
3sgtRCSB PDB    PDBbind253aa, >3SGT_1|Chains... at 100%
3sgvRCSB PDB    PDBbind253aa, >3SGV_1|Chains... at 100%
3sgxRCSB PDB    PDBbind253aa, >3SGX_1|Chains... at 100%
3sh0RCSB PDB    PDBbind253aa, >3SH0_1|Chains... at 100%
3th8RCSB PDB    PDBbind253aa, >3TH8_1|Chains... at 100%
3wyjRCSB PDB    PDBbind253aa, >3WYJ_1|Chains... at 100%
4h2jRCSB PDB    PDBbind253aa, >4H2J_1|Chains... at 100%
4h2mRCSB PDB    PDBbind253aa, >4H2M_1|Chains... at 100%
4h2oRCSB PDB    PDBbind253aa, >4H2O_1|Chains... at 100%
4h38RCSB PDB    PDBbind253aa, >4H38_1|Chains... at 100%
4h3aRCSB PDB    PDBbind253aa, >4H3A_1|Chains... at 100%
4h3cRCSB PDB    PDBbind253aa, >4H3C_1|Chains... at 100%
5cqjRCSB PDB    PDBbind253aa, >5CQJ_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4jkwRCSB PDB    PDBbindIPE

Entry Information
PDB ID1x07
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameundecaprenyl pyrophosphate synthetase
Ligand NameIPE
EC.Number E.C.2.5.1.31
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Kd=520uM
Release Year2005
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. v280 pp. 20762-74, 2005
Ligand Properties
Formula C5H14O7P2
Molecular Weight 248.108
Exact Mass 248.021
No. of atoms 28
No. of bonds 27
Polar Surface Area 146.79
LOGP Value -1.39      (Computed with XLOGP3)
0.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P60472  
Entrez Gene IDNCBI Entrez Gene ID: 944874  
ASDInformation of known allosteric effects of PDB entries

 
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