Browse entries in the PDBbind-CN Database

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Related entries of code: 1zm7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1oe0RCSB PDB    PDBbind230aa, >1OE0_1|Chains... *
2vppRCSB PDB    PDBbind230aa, >2VPP_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1h79RCSB PDB    PDBbindTTP
1oe0RCSB PDB    PDBbindTTP
2j4qRCSB PDB    PDBbindTTP
2j87RCSB PDB    PDBbindTTP
4uxjRCSB PDB    PDBbindTTP
5c2oRCSB PDB    PDBbindTTP
6czcRCSB PDB    PDBbindTTP
6ipjRCSB PDB    PDBbindTTP

Entry Information
PDB ID1zm7
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namedeoxyribonucleoside kinase
Ligand NameTTP
EC.Number E.C.2.7.1.145
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)IC50>1000uM
Release Year2005
Protein/NA SequenceCheck fasta file
Primary Reference Febs J. v272 pp. 3733-42, 2005
Ligand Properties
Formula C10H20N2O14P3
Molecular Weight 485.192
Exact Mass 485.013
No. of atoms 49
No. of bonds 50
Polar Surface Area 294.39
LOGP Value -5.12      (Computed with XLOGP3)
-2.48      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 10
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 16
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9XZT6  
Entrez Gene IDNCBI Entrez Gene ID: 42273  
ASDInformation of known allosteric effects of PDB entries

 
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