Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2c4v
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2c4wRCSB PDB    PDBbind176aa, >2C4W_1|Chain... at 95%
2c57RCSB PDB    PDBbind180aa, >2C57_1|Chains... *
2wksRCSB PDB    PDBbind167aa, >2WKS_1|Chains... at 100%
2xb9RCSB PDB    PDBbind167aa, >2XB9_1|Chains... at 100%
2xd9RCSB PDB    PDBbind167aa, >2XD9_1|Chains... at 100%
2xdaRCSB PDB    PDBbind167aa, >2XDA_1|Chain... at 100%
4b6rRCSB PDB    PDBbind167aa, >4B6R_1|Chains... at 100%
4b6sRCSB PDB    PDBbind167aa, >4B6S_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1i2sRCSB PDB    PDBbindCIT
1o4lRCSB PDB    PDBbindCIT
1rq2RCSB PDB    PDBbindCIT
2fw6RCSB PDB    PDBbindCIT
2fwpRCSB PDB    PDBbindCIT
2qpqRCSB PDB    PDBbindCIT
3itcRCSB PDB    PDBbindCIT
3kgqRCSB PDB    PDBbindCIT
4aciRCSB PDB    PDBbindCIT
4eu3RCSB PDB    PDBbindCIT
4o61RCSB PDB    PDBbindCIT
4oi6RCSB PDB    PDBbindCIT
4rgdRCSB PDB    PDBbindCIT
6knhRCSB PDB    PDBbindCIT
5go2RCSB PDB    PDBbindCIT
Entry Information
PDB ID2c4v
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Name3-dehydroquinate dehydratase
Ligand NameCIT
EC.Number E.C.4.2.1.10
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Ki=2.5mM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference J.Med.Chem.v49;pp.1282
Ligand Properties
Formula C6H8O7
Molecular Weight 192.124
Exact Mass 192.027
No. of atoms 21
No. of bonds 20
Polar Surface Area 132.13
LOGP Value 1.76      (Computed with XLOGP3)
-1.25      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q48255  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com