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Related entries of code: 2gej
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2gekRCSB PDB    PDBbind406aa, >2GEK_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3okaRCSB PDB    PDBbindGDD
3okpRCSB PDB    PDBbindGDD
5ogkRCSB PDB    PDBbindGDD

Entry Information
PDB ID2gej
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namephosphatidylinositol mannosyltransferase (PimA)
Ligand NameGDD
EC.Number E.C.-.-.-.-
Resolution 2.6(Å)
Affinity (Kd/Ki/IC50)Kd=0.23uM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference (2007) J.Biol.Chem. Vol. 282: pp. 20705-20714
Ligand Properties
Formula C16H28N5O16P2
Molecular Weight 608.365
Exact Mass 608.101
No. of atoms 67
No. of bonds 70
Polar Surface Area 367.69
LOGP Value -5.95      (Computed with XLOGP3)
-7.49      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 12
No. of Rotatable Bonds: 15
No. of Nitrogen and Oxygen Atoms: 21
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0QWG6  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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