Browse entries in the PDBbind-CN Database

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Related entries of code: 2ggd
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2ggaRCSB PDB    PDBbind455aa, >2GGA_1|Chain... *
2pqbRCSB PDB    PDBbind445aa, >2PQB_1|Chain... at 100%
2pqcRCSB PDB    PDBbind445aa, >2PQC_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2ggaRCSB PDB    PDBbindGPJ
2qftRCSB PDB    PDBbindGPJ
2qfuRCSB PDB    PDBbindGPJ

Entry Information
PDB ID2ggd
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Name3-phosphoshikimate 1-carboxyvinyltransferase
Ligand NameGPJ
EC.Number E.C.2.5.1.19
Resolution 1.7(Å)
Affinity (Kd/Ki/IC50)IC50=160uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference Proc.Natl.Acad.Sci.Usa v103 pp. 13010-5, 2006
Ligand Properties
Formula C3H10NO5P
Molecular Weight 171.089
Exact Mass 171.030
No. of atoms 20
No. of bonds 19
Polar Surface Area 128.19
LOGP Value -3.90      (Computed with XLOGP3)
-2.67      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9R4E4  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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