Browse entries in the PDBbind-CN Database

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Related entries of code: 2j77
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1oifRCSB PDB    PDBbind468aa, >1OIF_1|Chains... *
1oimRCSB PDB    PDBbind468aa, >1OIM_1|Chains... at 100%
1uz1RCSB PDB    PDBbind468aa, >1UZ1_1|Chains... at 100%
1w3jRCSB PDB    PDBbind468aa, >1W3J_1|Chains... at 100%
2cbuRCSB PDB    PDBbind468aa, >2CBU_1|Chains... at 100%
2cbvRCSB PDB    PDBbind468aa, >2CBV_1|Chains... at 100%
2cesRCSB PDB    PDBbind468aa, >2CES_1|Chains... at 100%
2cetRCSB PDB    PDBbind468aa, >2CET_1|Chains... at 100%
2j75RCSB PDB    PDBbind468aa, >2J75_1|Chains... at 100%
2j78RCSB PDB    PDBbind468aa, >2J78_1|Chains... at 100%
2j79RCSB PDB    PDBbind468aa, >2J79_1|Chains... at 100%
2j7bRCSB PDB    PDBbind468aa, >2J7B_1|Chains... at 100%
2j7dRCSB PDB    PDBbind468aa, >2J7D_1|Chains... at 100%
2j7eRCSB PDB    PDBbind468aa, >2J7E_1|Chains... at 100%
2j7fRCSB PDB    PDBbind468aa, >2J7F_1|Chains... at 100%
2j7gRCSB PDB    PDBbind468aa, >2J7G_1|Chains... at 100%
2j7hRCSB PDB    PDBbind468aa, >2J7H_1|Chains... at 100%
2jalRCSB PDB    PDBbind468aa, >2JAL_1|Chains... at 100%
2vrjRCSB PDB    PDBbind468aa, >2VRJ_1|Chains... at 100%
2wbgRCSB PDB    PDBbind468aa, >2WBG_1|Chains... at 100%
2wc3RCSB PDB    PDBbind468aa, >2WC3_1|Chains... at 100%
2wc4RCSB PDB    PDBbind468aa, >2WC4_1|Chains... at 100%
5n6sRCSB PDB    PDBbind468aa, >5N6S_1|Chains... at 100%
5ossRCSB PDB    PDBbind468aa, >5OSS_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1oimRCSB PDB    PDBbindNOJ
2jkeRCSB PDB    PDBbindNOJ
2pwdRCSB PDB    PDBbindNOJ
3gbeRCSB PDB    PDBbindNOJ
3gxtRCSB PDB    PDBbindNOJ
4iidRCSB PDB    PDBbindNOJ
5ieeRCSB PDB    PDBbindNOJ
5nn5RCSB PDB    PDBbindNOJ

Entry Information
PDB ID2j77
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namebeta-glucosidase a
Ligand NameNOJ
EC.Number E.C.3.2.1.21
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Kd=12.9uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference J.Am.Chem.Soc.v129;pp.2345
Ligand Properties
Formula C6H14NO4
Molecular Weight 164.180
Exact Mass 164.092
No. of atoms 25
No. of bonds 25
Polar Surface Area 97.53
LOGP Value -2.35      (Computed with XLOGP3)
-2.42      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q08638  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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