Browse entries in the PDBbind-CN Database

Display Options: Structure:  

Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2vx1
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2vwuRCSB PDB    PDBbind302aa, >2VWU_1|Chain... *
2vwvRCSB PDB    PDBbind302aa, >2VWV_1|Chain... at 100%
2vwwRCSB PDB    PDBbind302aa, >2VWW_1|Chain... at 100%
2vwxRCSB PDB    PDBbind302aa, >2VWX_1|Chain... at 100%
2vwyRCSB PDB    PDBbind302aa, >2VWY_1|Chain... at 100%
2vwzRCSB PDB    PDBbind302aa, >2VWZ_1|Chain... at 100%
2vx0RCSB PDB    PDBbind302aa, >2VX0_1|Chain... at 100%
2x9fRCSB PDB    PDBbind302aa, >2X9F_1|Chain... at 100%
2xvdRCSB PDB    PDBbind302aa, >2XVD_1|Chain... at 100%
4aw5RCSB PDB    PDBbind291aa, >4AW5_1|Chain... at 97%
4bb4RCSB PDB    PDBbind302aa, >4BB4_1|Chain... at 100%
6fniRCSB PDB    PDBbind297aa, >6FNI_1|Chain... at 98%
6fnjRCSB PDB    PDBbind297aa, >6FNJ_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2vx1
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameEphrin Type-B Receptor 4
Ligand Name7X8
EC.Number E.C.
Resolution 1.65(Å)
Affinity (Kd/Ki/IC50)IC50=0.220uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Bioorg.Med.Chem.Lett. Vol. 18: pp. 5717
Ligand Properties
Formula C18H14ClN5O3
Molecular Weight 383.788
Exact Mass 383.079
No. of atoms 41
No. of bonds 44
Polar Surface Area 111.39
LOGP Value 3.27      (Computed with XLOGP3)
4.29      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P54760  
Entrez Gene IDNCBI Entrez Gene ID: 2050  
ASDInformation of known allosteric effects of PDB entries

This site has been visited times since Nov 2007.

Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓

Technical Support锛堟妧鏈敮鎸侊級: