Browse entries in the PDBbind-CN Database

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Related entries of code: 2c97
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2c92RCSB PDB    PDBbind160aa, >2C92_1|Chains... *
2c94RCSB PDB    PDBbind160aa, >2C94_1|Chains... at 100%
2c9bRCSB PDB    PDBbind160aa, >2C9B_1|Chains... at 100%
2c9dRCSB PDB    PDBbind160aa, >2C9D_1|Chains... at 100%
2vi5RCSB PDB    PDBbind160aa, >2VI5_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2c97
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Name6,7-dimethyl-8-ribityllumazine synthase
Ligand NameJCL
EC.Number E.C.2.5.1.9
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=0.72uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference FEBS J.v273;pp.4790
Ligand Properties
Formula C8H13ClN2O6P
Molecular Weight 299.625
Exact Mass 299.020
No. of atoms 31
No. of bonds 31
Polar Surface Area 149.23
LOGP Value -1.09      (Computed with XLOGP3)
-0.29      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P9WHE9  
Entrez Gene IDNCBI Entrez Gene ID: 886681  
ASDInformation of known allosteric effects of PDB entries

 
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