Browse entries in the PDBbind-CN Database

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Related entries of code: 2fmb
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1fmbRCSB PDB    PDBbind104aa, >1FMB_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1odyRCSB PDB    PDBbindLP1
4fivRCSB PDB    PDBbindLP1

Entry Information
PDB ID2fmb
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nameeiav protease
Ligand NameLP1
EC.Number E.C.3.4.23.16
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)Ki=2nM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference Protein Sci. v7 pp. 2314-23, 1998
Ligand Properties
Formula C45H58N6O7
Molecular Weight 794.978
Exact Mass 794.437
No. of atoms 116
No. of bonds 119
Polar Surface Area 208.82
LOGP Value 5.68      (Computed with XLOGP3)
6.23      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 26
No. of Nitrogen and Oxygen Atoms: 13
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P32542  Q66729  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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