Browse entries in the PDBbind-CN Database

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Related entries of code: 2ggb
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1xnzRCSB PDB    PDBbind264aa, >1XNZ_1|Chain... at 100%
1yvmRCSB PDB    PDBbind264aa, >1YVM_1|Chain... at 99%
2bb7RCSB PDB    PDBbind264aa, >2BB7_1|Chain... at 100%
2evcRCSB PDB    PDBbind264aa, >2EVC_1|Chain... at 100%
2evmRCSB PDB    PDBbind264aa, >2EVM_1|Chain... at 100%
2evoRCSB PDB    PDBbind264aa, >2EVO_1|Chains... at 100%
2gg0RCSB PDB    PDBbind263aa, >2GG0_1|Chain... at 100%
2gg2RCSB PDB    PDBbind263aa, >2GG2_1|Chain... at 100%
2gg3RCSB PDB    PDBbind263aa, >2GG3_1|Chain... at 100%
2gg5RCSB PDB    PDBbind263aa, >2GG5_1|Chain... at 100%
2gg7RCSB PDB    PDBbind263aa, >2GG7_1|Chain... at 100%
2gg8RCSB PDB    PDBbind263aa, >2GG8_1|Chain... at 100%
2gg9RCSB PDB    PDBbind263aa, >2GG9_1|Chain... at 100%
2p98RCSB PDB    PDBbind262aa, >2P98_1|Chain... at 100%
2p99RCSB PDB    PDBbind261aa, >2P99_1|Chain... at 100%
2p9aRCSB PDB    PDBbind262aa, >2P9A_1|Chain... at 100%
2q92RCSB PDB    PDBbind262aa, >2Q92_1|Chain... at 100%
2q93RCSB PDB    PDBbind263aa, >2Q93_1|Chain... at 100%
2q94RCSB PDB    PDBbind262aa, >2Q94_1|Chain... at 100%
2q95RCSB PDB    PDBbind263aa, >2Q95_1|Chain... at 100%
2q96RCSB PDB    PDBbind263aa, >2Q96_1|Chain... at 100%
3d27RCSB PDB    PDBbind261aa, >3D27_1|Chain... at 100%
4a6vRCSB PDB    PDBbind265aa, >4A6V_1|Chains... *
4a6wRCSB PDB    PDBbind264aa, >4A6W_1|Chain... at 99%
4pncRCSB PDB    PDBbind264aa, >4PNC_1|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2ggb
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMethionine aminopeptidase
Ligand NameU17
EC.Number E.C.3.4.11.18
Resolution 2.13(Å)
Affinity (Kd/Ki/IC50)IC50=12uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference Proteins: Structures, Function and Bioinformatics. 2007, 66, 538-546.
Ligand Properties
Formula C17H30N3O6
Molecular Weight 372.437
Exact Mass 372.213
No. of atoms 56
No. of bonds 55
Polar Surface Area 152.6
LOGP Value -0.52      (Computed with XLOGP3)
-1.67      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 16
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0AE18  
Entrez Gene IDNCBI Entrez Gene ID: 61754842  947882  
ASDInformation of known allosteric effects of PDB entries
 
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