Browse entries in the PDBbind-CN Database

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Related entries of code: 3dsz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4iawRCSB PDB    PDBbind188aa, >4IAW_1|Chains... *
4iaxRCSB PDB    PDBbind188aa, >4IAX_1|Chain... at 94%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4iawRCSB PDB    PDBbindLIZ
4iaxRCSB PDB    PDBbindLIZ

Entry Information
PDB ID3dsz
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameEngineered human lipocalin 2((Lcn2))
Ligand NameLIZ
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=17.1nM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) J.Am.Chem.Soc. Vol. 131: pp. 3565-3576
Ligand Properties
Formula C30H48N5O13S
Molecular Weight 718.793
Exact Mass 718.297
No. of atoms 97
No. of bonds 98
Polar Surface Area 323.7
LOGP Value -3.07      (Computed with XLOGP3)
-5.53      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 13
No. of Rotatable Bonds: 22
No. of Nitrogen and Oxygen Atoms: 18
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P80188  
Entrez Gene IDNCBI Entrez Gene ID: 3934  
ASDInformation of known allosteric effects of PDB entries

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