Browse entries in the PDBbind-CN Database

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Related entries of code: 3pb9
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3pb7RCSB PDB    PDBbind330aa, >3PB7_1|Chain... *
3pb8RCSB PDB    PDBbind330aa, >3PB8_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2afxRCSB PDB    PDBbind1BN

Entry Information
PDB ID3pb9
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameGlutaminyl-peptide cyclotransferase-like protein锛坓QC锛
Ligand Name1BN
EC.Number E.C.2.3.2.5
Resolution 1.12(Å)
Affinity (Kd/Ki/IC50)Ki=0.262uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) J.Biol.Chem. Vol. 286: pp. 12439-12449
Ligand Properties
Formula C10H10N2
Molecular Weight 158.200
Exact Mass 158.084
No. of atoms 22
No. of bonds 23
Polar Surface Area 17.82
LOGP Value 1.61      (Computed with XLOGP3)
1.93      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9NXS2  
Entrez Gene IDNCBI Entrez Gene ID: 54814  
ASDInformation of known allosteric effects of PDB entries

 
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