Browse entries in the PDBbind-CN Database

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Related entries of code: 3tvx
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2qykRCSB PDB    PDBbind335aa, >2QYK_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2a3cRCSB PDB    PDBbindPNX
3arrRCSB PDB    PDBbindPNX
3aruRCSB PDB    PDBbindPNX

Entry Information
PDB ID3tvx
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamecAMP-specific 3',5'-cyclic phosphodiesterase 4A
Ligand NamePNX
EC.Number E.C.3.1.4.53
Resolution 2.84(Å)
Affinity (Kd/Ki/IC50)Ki=72uM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2012) J Biomol Screen Vol. 17: pp. 469-480
Ligand Properties
Formula C13H18N4O3
Molecular Weight 278.307
Exact Mass 278.138
No. of atoms 38
No. of bonds 39
Polar Surface Area 78.89
LOGP Value -0.06      (Computed with XLOGP3)
0.19      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P27815  
Entrez Gene IDNCBI Entrez Gene ID: 5141  
ASDInformation of known allosteric effects of PDB entries

 
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