Browse entries in the PDBbind-CN Database

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Related entries of code: 3b78
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1xk9RCSB PDB    PDBbind215aa, >1XK9_1|Chains... *
1zm4RCSB PDB    PDBbind207aa, >1ZM4_2|Chains... at 100%
2zitRCSB PDB    PDBbind207aa, >2ZIT_2|Chains... at 99%
3b82RCSB PDB    PDBbind207aa, >3B82_2|Chains... at 99%
3b8hRCSB PDB    PDBbind207aa, >3B8H_2|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2fr8RCSB PDB    PDBbindNAD
2frdRCSB PDB    PDBbindNAD
2fsvRCSB PDB    PDBbindNAD
2zitRCSB PDB    PDBbindNAD
3b82RCSB PDB    PDBbindNAD
3b8hRCSB PDB    PDBbindNAD

Entry Information
PDB ID3b78
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameElongation factor 2 and ExoA(R551H mutant) complex
Ligand NameNAD
EC.Number E.C.2.4.2.-
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Kd=80uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Embo Rep. Vol. 9: pp. 802-809
Ligand Properties
Formula C21H30N7O14P2
Molecular Weight 666.449
Exact Mass 666.133
No. of atoms 74
No. of bonds 78
Polar Surface Area 351.76
LOGP Value -6.12      (Computed with XLOGP3)
-2.61      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 12
No. of Rotatable Bonds: 15
No. of Nitrogen and Oxygen Atoms: 21
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P11439  P32324  
Entrez Gene IDNCBI Entrez Gene ID: 877850  851993  854301  
ASDInformation of known allosteric effects of PDB entries

 
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