Browse entries in the PDBbind-CN Database

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Related entries of code: 3c56
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3c52RCSB PDB    PDBbind307aa, >3C52_1|Chains... *
3n9rRCSB PDB    PDBbind307aa, >3N9R_1|Chains... at 100%
3n9sRCSB PDB    PDBbind307aa, >3N9S_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3c56
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameH. pylori Class II Fba
Ligand NamePH4
EC.Number E.C.4.1.2.13
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Ki=0.013uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Chemistry Vol. 14: pp. 8521-8529
Ligand Properties
Formula C5H15NO10P2
Molecular Weight 311.121
Exact Mass 311.017
No. of atoms 33
No. of bonds 32
Polar Surface Area 207.56
LOGP Value -4.26      (Computed with XLOGP3)
-2.06      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P56109  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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