Browse entries in the PDBbind-CN Database

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Related entries of code: 3fmz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1erbRCSB PDB    PDBbind183aa, >1ERB_1|Chain... at 92%
1rbpRCSB PDB    PDBbind182aa, >1RBP_1|Chain... at 100%
4o9sRCSB PDB    PDBbind215aa, >4O9S_1|Chains... *
4psqRCSB PDB    PDBbind212aa, >4PSQ_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3fmz
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameRetinol-binding protein 4 (RBP4)
Ligand Name2T1
EC.Number E.C.-.-.-.-
Resolution 2.9(Å)
Affinity (Kd/Ki/IC50)Ki=8.3nM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) J.Biol.Chem. Vol. 284: pp. 7673-7680
Ligand Properties
Formula C20H19F3N2O3
Molecular Weight 392.372
Exact Mass 392.135
No. of atoms 47
No. of bonds 49
Polar Surface Area 69.64
LOGP Value 5.39      (Computed with XLOGP3)
4.83      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P02753  
Entrez Gene IDNCBI Entrez Gene ID: 5950  
ASDInformation of known allosteric effects of PDB entries

 
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