Browse entries in the PDBbind-CN Database

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Related entries of code: 3ikg
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1f8aRCSB PDB    PDBbind167aa, >1F8A_1|Chain... *
2itkRCSB PDB    PDBbind167aa, >2ITK_1|Chain... at 99%
2xp3RCSB PDB    PDBbind167aa, >2XP3_1|Chain... at 99%
2xp4RCSB PDB    PDBbind167aa, >2XP4_1|Chain... at 99%
2xp5RCSB PDB    PDBbind167aa, >2XP5_1|Chain... at 99%
2xp6RCSB PDB    PDBbind167aa, >2XP6_1|Chain... at 98%
2xp7RCSB PDB    PDBbind167aa, >2XP7_1|Chain... at 99%
2xp8RCSB PDB    PDBbind167aa, >2XP8_1|Chain... at 99%
2xpaRCSB PDB    PDBbind167aa, >2XPA_1|Chain... at 99%
2xpbRCSB PDB    PDBbind167aa, >2XPB_1|Chain... at 99%
3i6cRCSB PDB    PDBbind123aa, >3I6C_1|Chains... at 95%
3ikdRCSB PDB    PDBbind123aa, >3IKD_1|Chains... at 95%
3jyjRCSB PDB    PDBbind123aa, >3JYJ_1|Chains... at 95%
3kabRCSB PDB    PDBbind167aa, >3KAB_1|Chain... at 99%
3kacRCSB PDB    PDBbind123aa, >3KAC_1|Chains... at 96%
3kadRCSB PDB    PDBbind167aa, >3KAD_1|Chain... at 98%
3kafRCSB PDB    PDBbind167aa, >3KAF_1|Chain... at 98%
3kagRCSB PDB    PDBbind167aa, >3KAG_1|Chain... at 99%
3kahRCSB PDB    PDBbind167aa, >3KAH_1|Chain... at 99%
3kaiRCSB PDB    PDBbind167aa, >3KAI_1|Chain... at 99%
3kceRCSB PDB    PDBbind167aa, >3KCE_1|Chain... at 99%
3ntpRCSB PDB    PDBbind167aa, >3NTP_1|Chain... at 99%
3odkRCSB PDB    PDBbind167aa, >3ODK_1|Chain... at 99%
3oobRCSB PDB    PDBbind163aa, >3OOB_1|Chain... at 99%
3tc5RCSB PDB    PDBbind166aa, >3TC5_1|Chain... at 97%
4tyoRCSB PDB    PDBbind123aa, >4TYO_1|Chains... at 95%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3ikg
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePeptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Ligand NameJ8Z
EC.Number E.C.5.2.1.8
Resolution 1.86(Å)
Affinity (Kd/Ki/IC50)Ki=0.057uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Bioorg.Med.Chem.Lett. Vol. 19: pp. 5613-5616
Ligand Properties
Formula C19H21NO5PS
Molecular Weight 406.413
Exact Mass 406.088
No. of atoms 48
No. of bonds 50
Polar Surface Area 140.85
LOGP Value 3.00      (Computed with XLOGP3)
3.61      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q13526  
Entrez Gene IDNCBI Entrez Gene ID: 5300  
ASDInformation of known allosteric effects of PDB entries
 
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