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Related entries of code: 3khv
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1ejnRCSB PDB    PDBbind253aa, >1EJN_1|Chain... at 99%
1f5kRCSB PDB    PDBbind253aa, >1F5K_1|Chain... at 99%
1f5lRCSB PDB    PDBbind253aa, >1F5L_1|Chain... at 99%
1f92RCSB PDB    PDBbind253aa, >1F92_1|Chain... at 99%
1fv9RCSB PDB    PDBbind245aa, >1FV9_1|Chain... at 99%
1owdRCSB PDB    PDBbind245aa, >1OWD_1|Chain... at 99%
1oweRCSB PDB    PDBbind245aa, >1OWE_1|Chain... at 99%
1owhRCSB PDB    PDBbind245aa, >1OWH_1|Chain... at 99%
1owiRCSB PDB    PDBbind245aa, >1OWI_1|Chain... at 99%
1owjRCSB PDB    PDBbind245aa, >1OWJ_1|Chain... at 99%
1owkRCSB PDB    PDBbind245aa, >1OWK_1|Chain... at 99%
1sc8RCSB PDB    PDBbind262aa, >1SC8_1|Chain... at 99%
1sqaRCSB PDB    PDBbind245aa, >1SQA_1|Chain... at 99%
1sqoRCSB PDB    PDBbind245aa, >1SQO_1|Chain... at 99%
1sqtRCSB PDB    PDBbind245aa, >1SQT_1|Chain... at 99%
1u6qRCSB PDB    PDBbind245aa, >1U6Q_1|Chain... at 99%
1vj9RCSB PDB    PDBbind262aa, >1VJ9_1|Chain... at 99%
1vjaRCSB PDB    PDBbind262aa, >1VJA_1|Chain... at 99%
1w0zRCSB PDB    PDBbind247aa, >1W0Z_1|Chain... at 99%
1w10RCSB PDB    PDBbind247aa, >1W10_1|Chain... at 99%
1w11RCSB PDB    PDBbind247aa, >1W11_1|Chain... at 99%
1w12RCSB PDB    PDBbind247aa, >1W12_1|Chain... at 99%
1w13RCSB PDB    PDBbind247aa, >1W13_1|Chain... at 99%
1w14RCSB PDB    PDBbind247aa, >1W14_1|Chain... at 99%
2r2wRCSB PDB    PDBbind253aa, >2R2W_1|Chain... at 99%
2vinRCSB PDB    PDBbind253aa, >2VIN_1|Chain... at 99%
2vioRCSB PDB    PDBbind253aa, >2VIO_1|Chain... at 99%
2vipRCSB PDB    PDBbind253aa, >2VIP_1|Chain... at 99%
2viqRCSB PDB    PDBbind253aa, >2VIQ_1|Chain... at 99%
2vivRCSB PDB    PDBbind253aa, >2VIV_1|Chain... at 99%
2viwRCSB PDB    PDBbind253aa, >2VIW_1|Chain... at 99%
2vntRCSB PDB    PDBbind276aa, >2VNT_1|Chains... at 96%
3kgpRCSB PDB    PDBbind253aa, >3KGP_1|Chain... at 99%
3kidRCSB PDB    PDBbind253aa, >3KID_1|Chain... at 99%
3mhwRCSB PDB    PDBbind247aa, >3MHW_1|Chain... at 99%
4h42RCSB PDB    PDBbind248aa, >4H42_1|Chain... at 99%
4mnvRCSB PDB    PDBbind245aa, >4MNV_1|Chain... at 99%
4x1nRCSB PDB    PDBbind247aa, >4X1N_2|Chain... at 98%
4x1pRCSB PDB    PDBbind247aa, >4X1P_1|Chain... at 98%
4x1qRCSB PDB    PDBbind247aa, >4X1Q_2|Chain... at 98%
4x1rRCSB PDB    PDBbind247aa, >4X1R_2|Chain... at 98%
4x1sRCSB PDB    PDBbind247aa, >4X1S_2|Chain... at 98%
4zhlRCSB PDB    PDBbind247aa, >4ZHL_1|Chain... at 98%
4zhmRCSB PDB    PDBbind247aa, >4ZHM_2|Chain... at 98%
5wxpRCSB PDB    PDBbind253aa, >5WXP_1|Chain... at 99%
5xg4RCSB PDB    PDBbind246aa, >5XG4_1|Chain... at 99%
5z1cRCSB PDB    PDBbind245aa, >5Z1C_1|Chain... at 99%
5za7RCSB PDB    PDBbind253aa, >5ZA7_1|Chain... at 99%
5za8RCSB PDB    PDBbind253aa, >5ZA8_1|Chain... at 99%
5za9RCSB PDB    PDBbind253aa, >5ZA9_1|Chain... at 99%
5zaeRCSB PDB    PDBbind253aa, >5ZAE_1|Chain... at 99%
5zafRCSB PDB    PDBbind253aa, >5ZAF_1|Chain... at 99%
5zagRCSB PDB    PDBbind253aa, >5ZAG_1|Chain... at 99%
5zahRCSB PDB    PDBbind253aa, >5ZAH_1|Chain... at 99%
5zajRCSB PDB    PDBbind253aa, >5ZAJ_1|Chain... at 99%
5zc5RCSB PDB    PDBbind253aa, >5ZC5_1|Chain... at 99%
6nmbRCSB PDB    PDBbind281aa, >6NMB_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3khv
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameUrokinase-type Plasminogen Activator
Ligand Name4AL
EC.Number E.C.
Resolution 2.35(Å)
Affinity (Kd/Ki/IC50)Ki=13.99mM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) CHIN.J.STRUCT.CHEM. Vol. 28: pp. 253-259
Ligand Properties
Formula C8H12NO
Molecular Weight 138.187
Exact Mass 138.092
No. of atoms 22
No. of bonds 22
Polar Surface Area 47.87
LOGP Value -0.11      (Computed with XLOGP3)
-0.08      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00749  
Entrez Gene IDNCBI Entrez Gene ID: 5328  
ASDInformation of known allosteric effects of PDB entries

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