Browse entries in the PDBbind-CN Database

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Related entries of code: 3l9h
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1q0bRCSB PDB    PDBbind367aa, >1Q0B_1|Chains... at 100%
1yrsRCSB PDB    PDBbind368aa, >1YRS_1|Chains... at 100%
2fkyRCSB PDB    PDBbind367aa, >2FKY_1|Chains... at 100%
2fl2RCSB PDB    PDBbind367aa, >2FL2_1|Chains... at 100%
2fl6RCSB PDB    PDBbind367aa, >2FL6_1|Chains... at 100%
2fmeRCSB PDB    PDBbind368aa, >2FME_1|Chains... at 100%
2g1qRCSB PDB    PDBbind368aa, >2G1Q_1|Chains... at 100%
2gm1RCSB PDB    PDBbind368aa, >2GM1_1|Chains... at 100%
2iehRCSB PDB    PDBbind367aa, >2IEH_1|Chains... at 100%
2pg2RCSB PDB    PDBbind368aa, >2PG2_1|Chains... at 100%
2q2yRCSB PDB    PDBbind367aa, >2Q2Y_1|Chains... at 100%
2q2zRCSB PDB    PDBbind367aa, >2Q2Z_1|Chains... at 100%
2uyiRCSB PDB    PDBbind368aa, >2UYI_1|Chains... at 100%
2uymRCSB PDB    PDBbind368aa, >2UYM_1|Chains... at 100%
2x2rRCSB PDB    PDBbind368aa, >2X2R_1|Chains... at 100%
2x7cRCSB PDB    PDBbind368aa, >2X7C_1|Chains... at 100%
2x7dRCSB PDB    PDBbind368aa, >2X7D_1|Chains... at 100%
2xaeRCSB PDB    PDBbind368aa, >2XAE_1|Chains... at 100%
3cjoRCSB PDB    PDBbind367aa, >3CJO_1|Chains... at 100%
3k3bRCSB PDB    PDBbind368aa, >3K3B_1|Chains... at 100%
3kenRCSB PDB    PDBbind369aa, >3KEN_1|Chain... at 100%
3wpnRCSB PDB    PDBbind382aa, >3WPN_1|Chain... *
3zcwRCSB PDB    PDBbind348aa, >3ZCW_1|Chain... at 100%
4a50RCSB PDB    PDBbind368aa, >4A50_1|Chain... at 100%
4a51RCSB PDB    PDBbind368aa, >4A51_1|Chains... at 100%
4ap0RCSB PDB    PDBbind370aa, >4AP0_1|Chains... at 99%
4bbgRCSB PDB    PDBbind368aa, >4BBG_1|Chain... at 100%
4bxnRCSB PDB    PDBbind368aa, >4BXN_1|Chains... at 100%
5zo7RCSB PDB    PDBbind367aa, >5ZO7_1|Chains... at 100%
5zo8RCSB PDB    PDBbind367aa, >5ZO8_1|Chains... at 100%
5zo9RCSB PDB    PDBbind367aa, >5ZO9_1|Chains... at 100%
6g6yRCSB PDB    PDBbind370aa, >6G6Y_1|Chain... at 99%
6g6zRCSB PDB    PDBbind370aa, >6G6Z_1|Chain... at 99%
6hkyRCSB PDB    PDBbind368aa, >6HKY_1|Chains... at 100%
6hkxRCSB PDB    PDBbind368aa, >6HKX_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3l9h
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameKinesin-like protein KIF11
Ligand NameEMQ
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)IC50=8nM
Release Year2010
Protein/NA SequenceCheck fasta file
Primary Reference (2010) Bioorg.Med.Chem.Lett. Vol. 20: pp. 1491-1495
Ligand Properties
Formula C25H32F3N4O2
Molecular Weight 477.542
Exact Mass 477.248
No. of atoms 66
No. of bonds 69
Polar Surface Area 66.83
LOGP Value 3.77      (Computed with XLOGP3)
4.07      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P52732  
Entrez Gene IDNCBI Entrez Gene ID: 3832  
ASDInformation of known allosteric effects of PDB entries

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