Browse entries in the PDBbind-CN Database

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Related entries of code: 3n75
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5u51RCSB PDB    PDBbindG4P
6g14RCSB PDB    PDBbindG4P
6d9sRCSB PDB    PDBbindG4P
6czfRCSB PDB    PDBbindG4P

Entry Information
PDB ID3n75
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameLysine decarboxylase, inducible, LdcI
Ligand NameG4P
EC.Number E.C.4.1.1.18
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=12.8nM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Embo J. Vol. 30: pp. 931-944
Ligand Properties
Formula C10H22N5O17P4
Molecular Weight 608.200
Exact Mass 607.996
No. of atoms 58
No. of bonds 60
Polar Surface Area 413.88
LOGP Value -6.87      (Computed with XLOGP3)
-3.97      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 13
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 22
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A9H3  
Entrez Gene IDNCBI Entrez Gene ID: 61753783  948643  
ASDInformation of known allosteric effects of PDB entries

 
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