Browse entries in the PDBbind-CN Database

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Related entries of code: 3p4r
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1kf6RCSB PDB    PDBbind119aa, >1KF6_4|Chains... *
1kfyRCSB PDB    PDBbind119aa, >1KFY_4|Chains... at 100%
3p4qRCSB PDB    PDBbind119aa, >3P4Q_4|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1czcRCSB PDB    PDBbindGUA
4lh3RCSB PDB    PDBbindGUA

Entry Information
PDB ID3p4r
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameEscherichia coli menaquinol:fumarate reductase (QFR)
Ligand NameGUA
EC.Number E.C.1.3.99.1
Resolution 3.05(Å)
Affinity (Kd/Ki/IC50)Ki=1.9mM
Release Year2010
Protein/NA SequenceCheck fasta file
Primary Reference (2011) J.Biol.Chem. Vol. 286: pp. 3047-3056
Ligand Properties
Formula C5H8O4
Molecular Weight 132.115
Exact Mass 132.042
No. of atoms 17
No. of bonds 16
Polar Surface Area 74.6
LOGP Value 2.46      (Computed with XLOGP3)
0.33      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00363  P0A8Q0  P0A8Q3  P0AC47  
Entrez Gene IDNCBI Entrez Gene ID: 61753808  948667  61753806  948680  61734463  948668  61753807  948666  
ASDInformation of known allosteric effects of PDB entries

 
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