Browse entries in the PDBbind-CN Database

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Related entries of code: 3ppp
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3ppoRCSB PDB    PDBbind311aa, >3PPO_1|Chains... *
3ppqRCSB PDB    PDBbind311aa, >3PPQ_1|Chains... at 100%
3pprRCSB PDB    PDBbind311aa, >3PPR_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1r9lRCSB PDB    PDBbindBET
1sw2RCSB PDB    PDBbindBET
2b4lRCSB PDB    PDBbindBET
3l6hRCSB PDB    PDBbindBET
3mamRCSB PDB    PDBbindBET

Entry Information
PDB ID3ppp
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameGlycine betaine/carnitine/choline-binding protein, OpuCC
Ligand NameBET
EC.Number E.C.-.-.-.-
Resolution 2.4(Å)
Affinity (Kd/Ki/IC50)Kd=6uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Biochem.J.
Ligand Properties
Formula C5H12NO2
Molecular Weight 118.154
Exact Mass 118.087
No. of atoms 20
No. of bonds 19
Polar Surface Area 37.3
LOGP Value 0.76      (Computed with XLOGP3)
-0.22      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O32243  
Entrez Gene IDNCBI Entrez Gene ID: 936248  
ASDInformation of known allosteric effects of PDB entries

 
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