Browse entries in the PDBbind-CN Database

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Related entries of code: 4ago
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2vukRCSB PDB    PDBbind219aa, >2VUK_1|Chains... at 100%
4aglRCSB PDB    PDBbind219aa, >4AGL_1|Chains... at 100%
4agmRCSB PDB    PDBbind219aa, >4AGM_1|Chains... at 100%
4agnRCSB PDB    PDBbind219aa, >4AGN_1|Chains... at 100%
4agpRCSB PDB    PDBbind219aa, >4AGP_1|Chains... at 100%
4agqRCSB PDB    PDBbind219aa, >4AGQ_1|Chains... at 100%
5a7bRCSB PDB    PDBbind219aa, >5A7B_1|Chains... at 100%
5ab0RCSB PDB    PDBbind292aa, >5AB0_2|Chains... *
5abaRCSB PDB    PDBbind219aa, >5ABA_1|Chains... at 100%
5aoiRCSB PDB    PDBbind219aa, >5AOI_1|Chains... at 100%
5aojRCSB PDB    PDBbind219aa, >5AOJ_1|Chains... at 100%
5aokRCSB PDB    PDBbind219aa, >5AOK_1|Chains... at 100%
5aolRCSB PDB    PDBbind219aa, >5AOL_1|Chains... at 100%
5aomRCSB PDB    PDBbind219aa, >5AOM_1|Chains... at 100%
5g4mRCSB PDB    PDBbind219aa, >5G4M_1|Chains... at 100%
5g4nRCSB PDB    PDBbind219aa, >5G4N_1|Chains... at 100%
5g4oRCSB PDB    PDBbind219aa, >5G4O_1|Chains... at 100%
5o1aRCSB PDB    PDBbind219aa, >5O1A_1|Chains... at 100%
5o1bRCSB PDB    PDBbind219aa, >5O1B_1|Chains... at 100%
5o1cRCSB PDB    PDBbind219aa, >5O1C_1|Chains... at 100%
5o1dRCSB PDB    PDBbind219aa, >5O1D_1|Chains... at 100%
5o1eRCSB PDB    PDBbind219aa, >5O1E_1|Chains... at 100%
5o1fRCSB PDB    PDBbind219aa, >5O1F_1|Chains... at 100%
5o1gRCSB PDB    PDBbind219aa, >5O1G_1|Chains... at 100%
5o1hRCSB PDB    PDBbind219aa, >5O1H_1|Chains... at 100%
5o1iRCSB PDB    PDBbind219aa, >5O1I_1|Chains... at 100%
6ggeRCSB PDB    PDBbind219aa, >6GGE_1|Chains... at 100%
6ggfRCSB PDB    PDBbind219aa, >6GGF_1|Chains... at 100%
6ggdRCSB PDB    PDBbind219aa, >6GGD_1|Chains... at 100%
6ggbRCSB PDB    PDBbind219aa, >6GGB_1|Chains... at 100%
6ggaRCSB PDB    PDBbind219aa, >6GGA_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4ago
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameCELLULAR TUMOR ANTIGEN p53 core domain mutant Y220C
Ligand NameP74
EC.Number E.C.-.-.-.-
Resolution 1.45(Å)
Affinity (Kd/Ki/IC50)Kd=15.5uM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2012) J.Am.Chem.Soc. Vol. 134: pp. 6810
Ligand Properties
Formula C24H38IN3O3
Molecular Weight 543.481
Exact Mass 543.196
No. of atoms 69
No. of bonds 70
Polar Surface Area 67.44
LOGP Value 4.27      (Computed with XLOGP3)
3.31      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P04637  
Entrez Gene IDNCBI Entrez Gene ID: 7157  
ASDInformation of known allosteric effects of PDB entries

 
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