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Related entries of code: 4tmk
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5tmpRCSB PDB    PDBbind213aa, >5TMP_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1mrnRCSB PDB    PDBbindT5A
3tmkRCSB PDB    PDBbindT5A
4uxhRCSB PDB    PDBbindT5A

Entry Information
PDB ID4tmk
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namethymidylate kinase
Ligand NameT5A
EC.Number E.C.
Resolution 1.98(Å)
Affinity (Kd/Ki/IC50)Kd=20nM
Release Year1998
Protein/NA SequenceCheck fasta file
Primary Reference Proc.Natl.Acad.Sci.USA v95 pp. 14045-50, 1998
Ligand Properties
Formula C20H35N7O23P5
Molecular Weight 896.394
Exact Mass 896.047
No. of atoms 90
No. of bonds 94
Polar Surface Area 529.26
LOGP Value -8.85      (Computed with XLOGP3)
-3.47      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 18
No. of Rotatable Bonds: 19
No. of Nitrogen and Oxygen Atoms: 30
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A720  
Entrez Gene IDNCBI Entrez Gene ID: 61755199  945663  
ASDInformation of known allosteric effects of PDB entries

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