Browse entries in the PDBbind-CN Database

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Related entries of code: 4bgx
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4bgyRCSB PDB    PDBbind166aa, >4BGY_2|Chain... at 100%
4bh3RCSB PDB    PDBbind167aa, >4BH3_2|Chain... at 100%
4bh4RCSB PDB    PDBbind167aa, >4BH4_2|Chain... at 100%
4k63RCSB PDB    PDBbind164aa, >4K63_2|Chains... at 98%
4k64RCSB PDB    PDBbind164aa, >4K64_2|Chains... at 98%
4k66RCSB PDB    PDBbind164aa, >4K66_2|Chains... at 98%
4k67RCSB PDB    PDBbind164aa, >4K67_2|Chains... at 98%
6cf5RCSB PDB    PDBbind177aa, >6CF5_2|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1uxaRCSB PDB    PDBbindSIA-GAL
1uxbRCSB PDB    PDBbindSIA-GAL
4konRCSB PDB    PDBbindSIA-GAL

Entry Information
PDB ID4bgx
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameH5 (VN1194) Influenza Virus Haemagglutinin
Ligand NameSIA-GAL
EC.Number E.C.-.-.-.-
Resolution 2.48(Å)
Affinity (Kd/Ki/IC50)Kd=17mM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Nature Vol. 497: pp. 392-397
Ligand Properties
Formula C17H29NO14
Molecular Weight 471.410
Exact Mass 471.159
No. of atoms 61
No. of bonds 62
Polar Surface Area 255.93
LOGP Value -4.73      (Computed with XLOGP3)
-5.66      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 9
No. of Hydrogen Bond Acceptors: 11
No. of Rotatable Bonds: 16
No. of Nitrogen and Oxygen Atoms: 15
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q6DQ34  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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