Browse entries in the PDBbind-CN Database

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Related entries of code: 4igr
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3s9eRCSB PDB    PDBbind258aa, >3S9E_1|Chains... *
3u92RCSB PDB    PDBbind257aa, >3U92_1|Chains... at 99%
3u93RCSB PDB    PDBbind257aa, >3U93_1|Chains... at 99%
4e0wRCSB PDB    PDBbind258aa, >4E0W_1|Chain... at 100%
4g8nRCSB PDB    PDBbind258aa, >4G8N_1|Chain... at 100%
4nwcRCSB PDB    PDBbind258aa, >4NWC_1|Chain... at 100%
4nwdRCSB PDB    PDBbind258aa, >4NWD_1|Chain... at 100%
5nf6RCSB PDB    PDBbind258aa, >5NF6_1|Chains... at 100%
5o4fRCSB PDB    PDBbind258aa, >5O4F_1|Chains... at 100%
6f28RCSB PDB    PDBbind258aa, >6F28_1|Chains... at 100%
6f29RCSB PDB    PDBbind258aa, >6F29_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4igtRCSB PDB    PDBbind3ZA
Entry Information
PDB ID4igr
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGlutamate receptor, ionotropic kainate 3
Ligand Name3ZA
EC.Number E.C.-.-.-.-
Resolution 2.65(Å)
Affinity (Kd/Ki/IC50)Kd=63nM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) J.Med.Chem. Vol.56: pp.1614-1628
Ligand Properties
Formula C9H17N2O6
Molecular Weight 249.241
Exact Mass 249.109
No. of atoms 34
No. of bonds 33
Polar Surface Area 142.78
LOGP Value -2.09      (Computed with XLOGP3)
-1.60      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P42264  
Entrez Gene IDNCBI Entrez Gene ID: 298521  
ASDInformation of known allosteric effects of PDB entries
 
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