Browse entries in the PDBbind-CN Database

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Related entries of code: 4qf7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1fv0RCSB PDB    PDBbind121aa, >1FV0_1|Chains... *
1jq8RCSB PDB    PDBbind121aa, >1JQ8_1|Chains... at 100%
1jq9RCSB PDB    PDBbind121aa, >1JQ9_1|Chains... at 100%
1kpmRCSB PDB    PDBbind121aa, >1KPM_1|Chains... at 100%
1q7aRCSB PDB    PDBbind121aa, >1Q7A_1|Chain... at 100%
1sv3RCSB PDB    PDBbind121aa, >1SV3_1|Chain... at 100%
2armRCSB PDB    PDBbind121aa, >2ARM_1|Chain... at 100%
2b17RCSB PDB    PDBbind121aa, >2B17_1|Chain... at 100%
3h1xRCSB PDB    PDBbind121aa, >3H1X_1|Chain... at 100%
4qemRCSB PDB    PDBbind121aa, >4QEM_1|Chain... at 100%
4qerRCSB PDB    PDBbind121aa, >4QER_1|Chain... at 100%
4qf8RCSB PDB    PDBbind121aa, >4QF8_1|Chain... at 100%
4qgdRCSB PDB    PDBbind121aa, >4QGD_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6hgiRCSB PDB    PDBbindC0R
Entry Information
PDB ID4qf7
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePhospholipase A2 VRV-PL-VIIIa
Ligand NameC0R
EC.Number E.C.3.1.1.4
Resolution 1.48(Å)
Affinity (Kd/Ki/IC50)Kd=2.5nM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Biochim.Biophys.Acta Vol. 1854: pp. 269-277
Ligand Properties
Formula C21H28O4
Molecular Weight 344.445
Exact Mass 344.199
No. of atoms 53
No. of bonds 56
Polar Surface Area 71.44
LOGP Value 1.72      (Computed with XLOGP3)
2.87      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P59071  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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