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Related entries of code: 5b2d
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6jjnRCSB PDB    PDBbind489aa, >6JJN_1|Chains... at 100%
6jjmRCSB PDB    PDBbind489aa, >6JJM_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4c1wRCSB PDB    PDBbindSLT
4yz5RCSB PDB    PDBbindSLT
Entry Information
PDB ID5b2d
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameMumps virus hemagglutinin-neuraminidase
Ligand NameSLT
EC.Number E.C.3.2.1.18
Resolution 2.18(Å)
Affinity (Kd/Ki/IC50)Kd=56uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Proc.Natl.Acad.Sci.USA Vol. 113: pp. 11579-11584
Ligand Properties
Formula C23H39NO19
Molecular Weight 633.551
Exact Mass 633.212
No. of atoms 82
No. of bonds 84
Polar Surface Area 335.08
LOGP Value -6.32      (Computed with XLOGP3)
-7.83      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 12
No. of Hydrogen Bond Acceptors: 14
No. of Rotatable Bonds: 22
No. of Nitrogen and Oxygen Atoms: 20
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9WAF5  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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