Browse entries in the PDBbind-CN Database

Display Options: Structure:  

Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 5dq8
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5dqeRCSB PDB    PDBbind240aa, >5DQE_1|Chains... at 100%
6e5gRCSB PDB    PDBbind235aa, >6E5G_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1bm7RCSB PDB    PDBbindFLF
2pixRCSB PDB    PDBbindFLF

Entry Information
PDB ID5dq8
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namehuman transcription factor TEAD2
Ligand NameFLF
EC.Number E.C.-.-.-.-
Resolution 2.31(Å)
Affinity (Kd/Ki/IC50)Kd=73uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Structure Vol. 23: pp. 2076-2086
Ligand Properties
Formula C14H10F3NO2
Molecular Weight 281.230
Exact Mass 281.066
No. of atoms 30
No. of bonds 31
Polar Surface Area 49.33
LOGP Value 5.51      (Computed with XLOGP3)
4.22      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q15562  
Entrez Gene IDNCBI Entrez Gene ID: 8463  
ASDInformation of known allosteric effects of PDB entries

This site has been visited times since Nov 2007.

Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓

Technical Support锛堟妧鏈敮鎸侊級: