Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 5f29
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4d3hRCSB PDB    PDBbind2BA
4qshRCSB PDB    PDBbind2BA
4qskRCSB PDB    PDBbind2BA
4rwwRCSB PDB    PDBbind2BA
4wk1RCSB PDB    PDBbind2BA
4xttRCSB PDB    PDBbind2BA
4yp1RCSB PDB    PDBbind2BA
5ks7RCSB PDB    PDBbind2BA
5uxfRCSB PDB    PDBbind2BA
6a03RCSB PDB    PDBbind2BA

Entry Information
PDB ID5f29
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namecation-roton antiporter RCK protein
Ligand Name2BA
EC.Number E.C.-.-.-.-
Resolution 1.82(Å)
Affinity (Kd/Ki/IC50)Kd=9uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Biochemistry Vol. 54: pp. 4936-4951
Ligand Properties
Formula C20H28N10O12P2
Molecular Weight 662.444
Exact Mass 662.136
No. of atoms 72
No. of bonds 77
Polar Surface Area 354.18
LOGP Value -5.38      (Computed with XLOGP3)
-1.37      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 13
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 22
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q2FZQ4  
Entrez Gene IDNCBI Entrez Gene ID: 3920775  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com