Browse entries in the PDBbind-CN Database

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Related entries of code: 5hkh
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6h77RCSB PDB    PDBbind78aa, >6H77_2|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1bmbRCSB PDB    PDBbind9-mer
1f90RCSB PDB    PDBbind9-mer
1fzkRCSB PDB    PDBbind9-mer
1fzoRCSB PDB    PDBbind9-mer
1g3fRCSB PDB    PDBbind9-mer
1g7pRCSB PDB    PDBbind9-mer
1guxRCSB PDB    PDBbind9-mer
1gwqRCSB PDB    PDBbind9-mer
1h24RCSB PDB    PDBbind9-mer
1inqRCSB PDB    PDBbind9-mer
1jp5RCSB PDB    PDBbind9-mer
1jufRCSB PDB    PDBbind9-mer
1kl3RCSB PDB    PDBbind9-mer
1kl5RCSB PDB    PDBbind9-mer
1lb6RCSB PDB    PDBbind9-mer
1mfgRCSB PDB    PDBbind9-mer
1mpaRCSB PDB    PDBbind9-mer
1nloRCSB PDB    PDBbind9-mer
1oaiRCSB PDB    PDBbind9-mer
1oxnRCSB PDB    PDBbind9-mer
1oxqRCSB PDB    PDBbind9-mer
1oy7RCSB PDB    PDBbind9-mer
1pcgRCSB PDB    PDBbind9-mer
1prlRCSB PDB    PDBbind9-mer
1prmRCSB PDB    PDBbind9-mer
1rlpRCSB PDB    PDBbind9-mer
1rlqRCSB PDB    PDBbind9-mer
1rstRCSB PDB    PDBbind9-mer
1utcRCSB PDB    PDBbind9-mer
1vwfRCSB PDB    PDBbind9-mer
1vwlRCSB PDB    PDBbind9-mer
1x7qRCSB PDB    PDBbind9-mer
1xr8RCSB PDB    PDBbind9-mer
1xr9RCSB PDB    PDBbind9-mer
1zeaRCSB PDB    PDBbind9-mer
2bgnRCSB PDB    PDBbind9-mer
2bgrRCSB PDB    PDBbind9-mer
2e7lRCSB PDB    PDBbind9-mer
2gv2RCSB PDB    PDBbind9-mer
2h6qRCSB PDB    PDBbind9-mer
2hkfRCSB PDB    PDBbind9-mer
2jo9RCSB PDB    PDBbind9-mer
2jupRCSB PDB    PDBbind9-mer
2kgiRCSB PDB    PDBbind9-mer
2khhRCSB PDB    PDBbind9-mer
2lnwRCSB PDB    PDBbind9-mer
2lsvRCSB PDB    PDBbind9-mer
2mpaRCSB PDB    PDBbind9-mer
2ms4RCSB PDB    PDBbind9-mer
2oeiRCSB PDB    PDBbind9-mer
2oi9RCSB PDB    PDBbind9-mer
2q8yRCSB PDB    PDBbind9-mer
2qt5RCSB PDB    PDBbind9-mer
2rm0RCSB PDB    PDBbind9-mer
2v83RCSB PDB    PDBbind9-mer
2v86RCSB PDB    PDBbind9-mer
2vpeRCSB PDB    PDBbind9-mer
2w0zRCSB PDB    PDBbind9-mer
2x3tRCSB PDB    PDBbind9-mer
2x4oRCSB PDB    PDBbind9-mer
2x4rRCSB PDB    PDBbind9-mer
2x4sRCSB PDB    PDBbind9-mer
2x4tRCSB PDB    PDBbind9-mer
2x4uRCSB PDB    PDBbind9-mer
2xhsRCSB PDB    PDBbind9-mer
2ymtRCSB PDB    PDBbind9-mer
3ah8RCSB PDB    PDBbind9-mer
3bgmRCSB PDB    PDBbind9-mer
3bzeRCSB PDB    PDBbind9-mer
3bzfRCSB PDB    PDBbind9-mer
3bziRCSB PDB    PDBbind9-mer
3ciiRCSB PDB    PDBbind9-mer
3cyyRCSB PDB    PDBbind9-mer
3d1fRCSB PDB    PDBbind9-mer
3d25RCSB PDB    PDBbind9-mer
3drgRCSB PDB    PDBbind9-mer
3eryRCSB PDB    PDBbind9-mer
3fbrRCSB PDB    PDBbind9-mer
3fn0RCSB PDB    PDBbind9-mer
3ft2RCSB PDB    PDBbind9-mer
3ft3RCSB PDB    PDBbind9-mer
3ft4RCSB PDB    PDBbind9-mer
3gl6RCSB PDB    PDBbind9-mer
3ietRCSB PDB    PDBbind9-mer
3k27RCSB PDB    PDBbind9-mer
3lqiRCSB PDB    PDBbind9-mer
3lqjRCSB PDB    PDBbind9-mer
3mxcRCSB PDB    PDBbind9-mer
3mxyRCSB PDB    PDBbind9-mer
3o4lRCSB PDB    PDBbind9-mer
3o6mRCSB PDB    PDBbind9-mer
3obqRCSB PDB    PDBbind9-mer
3obuRCSB PDB    PDBbind9-mer
3obxRCSB PDB    PDBbind9-mer
3qfdRCSB PDB    PDBbind9-mer
3r0hRCSB PDB    PDBbind9-mer
3r42RCSB PDB    PDBbind9-mer
3rwcRCSB PDB    PDBbind9-mer
3rweRCSB PDB    PDBbind9-mer
3rwfRCSB PDB    PDBbind9-mer
3rwgRCSB PDB    PDBbind9-mer
3soqRCSB PDB    PDBbind9-mer
3souRCSB PDB    PDBbind9-mer
3sovRCSB PDB    PDBbind9-mer
3sowRCSB PDB    PDBbind9-mer
3t5iRCSB PDB    PDBbind9-mer
3tf7RCSB PDB    PDBbind9-mer
3tfkRCSB PDB    PDBbind9-mer
3tjhRCSB PDB    PDBbind9-mer
3tpuRCSB PDB    PDBbind9-mer
3zhfRCSB PDB    PDBbind9-mer
4bt9RCSB PDB    PDBbind9-mer
4btbRCSB PDB    PDBbind9-mer
4cdrRCSB PDB    PDBbind9-mer
4ezqRCSB PDB    PDBbind9-mer
4eztRCSB PDB    PDBbind9-mer
4fcmRCSB PDB    PDBbind9-mer
4fmnRCSB PDB    PDBbind9-mer
4i80RCSB PDB    PDBbind9-mer
4ihoRCSB PDB    PDBbind9-mer
4j3uRCSB PDB    PDBbind9-mer
4mexRCSB PDB    PDBbind9-mer
4mnqRCSB PDB    PDBbind9-mer
4mzfRCSB PDB    PDBbind9-mer
4mzhRCSB PDB    PDBbind9-mer
4o2eRCSB PDB    PDBbind9-mer
4od7RCSB PDB    PDBbind9-mer
4pg9RCSB PDB    PDBbind9-mer
4pgbRCSB PDB    PDBbind9-mer
4pgcRCSB PDB    PDBbind9-mer
4pgdRCSB PDB    PDBbind9-mer
4pgeRCSB PDB    PDBbind9-mer
4qbmRCSB PDB    PDBbind9-mer
4rh5RCSB PDB    PDBbind9-mer
4utnRCSB PDB    PDBbind9-mer
4utrRCSB PDB    PDBbind9-mer
4utvRCSB PDB    PDBbind9-mer
4utxRCSB PDB    PDBbind9-mer
4uu7RCSB PDB    PDBbind9-mer
4uu8RCSB PDB    PDBbind9-mer
4uuaRCSB PDB    PDBbind9-mer
4uubRCSB PDB    PDBbind9-mer
4x3hRCSB PDB    PDBbind9-mer
4y5iRCSB PDB    PDBbind9-mer
4yozRCSB PDB    PDBbind9-mer
5aprRCSB PDB    PDBbind9-mer
5brzRCSB PDB    PDBbind9-mer
5bs0RCSB PDB    PDBbind9-mer
5cvdRCSB PDB    PDBbind9-mer
5d0jRCSB PDB    PDBbind9-mer
5dmsRCSB PDB    PDBbind9-mer
5e4wRCSB PDB    PDBbind9-mer
5eelRCSB PDB    PDBbind9-mer
5eokRCSB PDB    PDBbind9-mer
5fjwRCSB PDB    PDBbind9-mer
5gu4RCSB PDB    PDBbind9-mer
5hdaRCSB PDB    PDBbind9-mer
5hebRCSB PDB    PDBbind9-mer
5hedRCSB PDB    PDBbind9-mer
5heyRCSB PDB    PDBbind9-mer
5hf1RCSB PDB    PDBbind9-mer
5hfbRCSB PDB    PDBbind9-mer
5hfcRCSB PDB    PDBbind9-mer
5hffRCSB PDB    PDBbind9-mer
5hjcRCSB PDB    PDBbind9-mer
5i8cRCSB PDB    PDBbind9-mer
5iszRCSB PDB    PDBbind9-mer
5jhdRCSB PDB    PDBbind9-mer
5lb7RCSB PDB    PDBbind9-mer
5lgsRCSB PDB    PDBbind9-mer
5nmeRCSB PDB    PDBbind9-mer
5nmfRCSB PDB    PDBbind9-mer
5nmgRCSB PDB    PDBbind9-mer
5nprRCSB PDB    PDBbind9-mer
5npsRCSB PDB    PDBbind9-mer
5swfRCSB PDB    PDBbind9-mer
5u98RCSB PDB    PDBbind9-mer
5w1vRCSB PDB    PDBbind9-mer
5w1wRCSB PDB    PDBbind9-mer
5w7xRCSB PDB    PDBbind9-mer
5yc3RCSB PDB    PDBbind9-mer
5yc4RCSB PDB    PDBbind9-mer
5ygfRCSB PDB    PDBbind9-mer
5yvxRCSB PDB    PDBbind9-mer
5yy4RCSB PDB    PDBbind9-mer
5ziaRCSB PDB    PDBbind9-mer
6bj2RCSB PDB    PDBbind9-mer
6bj3RCSB PDB    PDBbind9-mer
6c4uRCSB PDB    PDBbind9-mer
6evmRCSB PDB    PDBbind9-mer
6evnRCSB PDB    PDBbind9-mer
6evoRCSB PDB    PDBbind9-mer
6evpRCSB PDB    PDBbind9-mer
6fdpRCSB PDB    PDBbind9-mer
6fdtRCSB PDB    PDBbind9-mer
6qtsRCSB PDB    PDBbind9-mer
6qtqRCSB PDB    PDBbind9-mer
6q38RCSB PDB    PDBbind9-mer
6o9cRCSB PDB    PDBbind9-mer
6o9bRCSB PDB    PDBbind9-mer
6ncpRCSB PDB    PDBbind9-mer
6mt6RCSB PDB    PDBbind9-mer
6mt5RCSB PDB    PDBbind9-mer
6mt4RCSB PDB    PDBbind9-mer
6i7aRCSB PDB    PDBbind9-mer
6i68RCSB PDB    PDBbind9-mer
6i5pRCSB PDB    PDBbind9-mer
6i41RCSB PDB    PDBbind9-mer
6hlbRCSB PDB    PDBbind9-mer
6eqaRCSB PDB    PDBbind9-mer
6d78RCSB PDB    PDBbind9-mer
6aeeRCSB PDB    PDBbind9-mer
5y5wRCSB PDB    PDBbind9-mer
5wlgRCSB PDB    PDBbind9-mer
5u1qRCSB PDB    PDBbind9-mer
5u06RCSB PDB    PDBbind9-mer
5tyiRCSB PDB    PDBbind9-mer
5izaRCSB PDB    PDBbind9-mer
5iz9RCSB PDB    PDBbind9-mer
5iz6RCSB PDB    PDBbind9-mer
6a9cRCSB PDB    PDBbind9-mer
5b6gRCSB PDB    PDBbind9-mer

Entry Information
PDB ID5hkh
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameUbiquitin-fold modifier 1, Ufm1
Ligand Name9-mer
EC.Number E.C.-.-.-.-
Resolution 2.55(Å)
Affinity (Kd/Ki/IC50)Kd=8.1uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) J.Biol.Chem. Vol. 291: pp. 9025-9041
Ligand Properties
Formula C48H72N11O17
Molecular Weight 1075.150
Exact Mass 1074.510
No. of atoms 148
No. of bonds 149
Polar Surface Area 468.52
LOGP Value 1.70      (Computed with XLOGP3)
0.57      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 11
No. of Hydrogen Bond Acceptors: 17
No. of Rotatable Bonds: 38
No. of Nitrogen and Oxygen Atoms: 28
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P61960  Q9GZZ9  
Entrez Gene IDNCBI Entrez Gene ID: 51569  79876  
ASDInformation of known allosteric effects of PDB entries

 
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