Browse entries in the PDBbind-CN Database

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Related entries of code: 5i3a
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5i38RCSB PDB    PDBbind287aa, >5I38_1|Chains... at 100%
5oaeRCSB PDB    PDBbind287aa, >5OAE_1|Chains... at 100%
6ei4RCSB PDB    PDBbind288aa, >6EI4_1|Chains... *
6qxdRCSB PDB    PDBbind287aa, >6QXD_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4e3hRCSB PDB    PDBbindHQE

Entry Information
PDB ID5i3a
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nametyrosinase from Bacillus megaterium
Ligand NameHQE
EC.Number E.C.-.-.-.-
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Kd=9uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Sci Rep Vol. 6: pp. 34993-34993
Ligand Properties
Formula C6H6O2
Molecular Weight 110.111
Exact Mass 110.037
No. of atoms 14
No. of bonds 14
Polar Surface Area 40.46
LOGP Value 1.21      (Computed with XLOGP3)
1.10      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): B2ZB02  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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