Browse entries in the PDBbind-CN Database

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Related entries of code: 5igl
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5c7nRCSB PDB    PDBbindBMF
5igkRCSB PDB    PDBbindBMF
5igmRCSB PDB    PDBbindBMF

Entry Information
PDB ID5igl
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namesecond bromodomain of human TAF1L
Ligand NameBMF
EC.Number E.C.-.-.-.-
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Kd=42.7nM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Sci Adv Vol. 2: pp. e1600760-e1600760
Ligand Properties
Formula C17H20N6O4S
Molecular Weight 404.444
Exact Mass 404.127
No. of atoms 48
No. of bonds 50
Polar Surface Area 135.96
LOGP Value 1.08      (Computed with XLOGP3)
3.57      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 10
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8IZX4  
Entrez Gene IDNCBI Entrez Gene ID: 138474  
ASDInformation of known allosteric effects of PDB entries

 
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