Browse entries in the PDBbind-CN Database

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Related entries of code: 5jqb
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5f1bRCSB PDB    PDBbind130aa, >5F1B_2|Chain... at 94%
5jq7RCSB PDB    PDBbind168aa, >5JQ7_2|Chain... *
6f5uRCSB PDB    PDBbind168aa, >6F5U_2|Chain... at 99%
6f6iRCSB PDB    PDBbind168aa, >6F6I_2|Chain... at 99%
6f6nRCSB PDB    PDBbind168aa, >6F6N_2|Chain... at 99%
6f6sRCSB PDB    PDBbind168aa, >6F6S_2|Chain... at 99%
6g9bRCSB PDB    PDBbind168aa, >6G9B_2|Chain... at 99%
6g9iRCSB PDB    PDBbind168aa, >6G9I_2|Chain... at 99%
6mamRCSB PDB    PDBbind110aa, >6MAM_4|Chains... at 100%
6hs4RCSB PDB    PDBbind168aa, >6HS4_2|Chain... at 99%
6hroRCSB PDB    PDBbind168aa, >6HRO_2|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4rs0RCSB PDB    PDBbindIBP

Entry Information
PDB ID5jqb
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameEbola glycoprotein
Ligand NameIBP
EC.Number E.C.-.-.-.-
Resolution 2.68(Å)
Affinity (Kd/Ki/IC50)Kd=6mM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Nature Vol. 535: pp. 168-172
Ligand Properties
Formula C13H18O2
Molecular Weight 206.281
Exact Mass 206.131
No. of atoms 33
No. of bonds 33
Polar Surface Area 37.3
LOGP Value 4.75      (Computed with XLOGP3)
3.07      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q05320  
Entrez Gene IDNCBI Entrez Gene ID: 911829  
ASDInformation of known allosteric effects of PDB entries

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