Browse entries in the PDBbind-CN Database

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Related entries of code: 5kbe
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5kbgRCSB PDB    PDBbind229aa, >5KBG_1|Chains... at 100%
5kbhRCSB PDB    PDBbind229aa, >5KBH_1|Chains... at 100%
5kbiRCSB PDB    PDBbind229aa, >5KBI_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1ai7RCSB PDB    PDBbindIPH
1li2RCSB PDB    PDBbindIPH
3f39RCSB PDB    PDBbindIPH
4i7lRCSB PDB    PDBbindIPH

Entry Information
PDB ID5kbe
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namesensor domain of MopR (MopRAB) from Acinetobacter calcoaceticus
Ligand NameIPH
EC.Number E.C.-.-.-.-
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Kd=0.46uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Acs Chem.Biol. Vol. 11: pp. 2357-2365
Ligand Properties
Formula C6H6O
Molecular Weight 94.111
Exact Mass 94.042
No. of atoms 13
No. of bonds 13
Polar Surface Area 20.23
LOGP Value 1.57      (Computed with XLOGP3)
1.39      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 1
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q43965  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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