Browse entries in the PDBbind-CN Database

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Related entries of code: 5kcv
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2uvmRCSB PDB    PDBbind123aa, >2UVM_1|Chain... at 96%
3o96RCSB PDB    PDBbind446aa, >3O96_1|Chain... at 98%
4ejnRCSB PDB    PDBbind446aa, >4EJN_1|Chain... at 100%
6hhjRCSB PDB    PDBbind446aa, >6HHJ_1|Chain... at 100%
6hhhRCSB PDB    PDBbind446aa, >6HHH_1|Chain... at 100%
6hhiRCSB PDB    PDBbind446aa, >6HHI_1|Chain... at 100%
6hhgRCSB PDB    PDBbind446aa, >6HHG_1|Chain... at 100%
6s9wRCSB PDB    PDBbind446aa, >6S9W_1|Chain... at 100%
6s9xRCSB PDB    PDBbind446aa, >6S9X_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5kcv
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameautoinhibited form of AKT1
Ligand Name6S1
EC.Number E.C.2.7.11.1
Resolution 2.7(Å)
Affinity (Kd/Ki/IC50)IC50=5nM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) J.Med.Chem. Vol. 59: pp. 6455-6469
Ligand Properties
Formula C27H25N6
Molecular Weight 433.528
Exact Mass 433.214
No. of atoms 58
No. of bonds 63
Polar Surface Area 97.26
LOGP Value 3.83      (Computed with XLOGP3)
4.93      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P31749  
Entrez Gene IDNCBI Entrez Gene ID: 207  
ASDInformation of known allosteric effects of PDB entries

 
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