Browse entries in the PDBbind-CN Database

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Related entries of code: 5kns
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1g9sRCSB PDB    PDBbind182aa, >1G9S_1|Chains... *
1g9tRCSB PDB    PDBbind182aa, >1G9T_1|Chains... at 100%
5knrRCSB PDB    PDBbind182aa, >5KNR_1|Chains... at 99%
5kntRCSB PDB    PDBbind182aa, >5KNT_1|Chains... at 99%
5knuRCSB PDB    PDBbind182aa, >5KNU_1|Chains... at 99%
5knvRCSB PDB    PDBbind182aa, >5KNV_1|Chains... at 99%
5knxRCSB PDB    PDBbind182aa, >5KNX_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4raoRCSB PDB    PDBbind3L7

Entry Information
PDB ID5kns
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHypoxanthine Phosphoribosyltransferase
Ligand Name3L7
EC.Number E.C.-.-.-.-
Resolution 2.79(Å)
Affinity (Kd/Ki/IC50)Ki=0.75uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Chemistryselect Vol. 1: pp. 6267-6276
Ligand Properties
Formula C13H25N5O8P2
Molecular Weight 441.314
Exact Mass 441.118
No. of atoms 53
No. of bonds 54
Polar Surface Area 224.6
LOGP Value -6.97      (Computed with XLOGP3)
-2.08      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 13
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A9M2  
Entrez Gene IDNCBI Entrez Gene ID: 61752630  946624  
ASDInformation of known allosteric effects of PDB entries

 
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