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Related entries of code: 5mgm
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4qbmRCSB PDB    PDBbind106aa, >4QBM_1|Chains... *
5mgjRCSB PDB    PDBbind105aa, >5MGJ_1|Chain... at 100%
5mgkRCSB PDB    PDBbind105aa, >5MGK_1|Chain... at 100%
5mglRCSB PDB    PDBbind105aa, >5MGL_1|Chain... at 100%
6fg6RCSB PDB    PDBbind105aa, >6FG6_1|Chain... at 100%
6fgfRCSB PDB    PDBbind105aa, >6FGF_1|Chain... at 100%
6fggRCSB PDB    PDBbind106aa, >6FGG_1|Chain... at 100%
6fglRCSB PDB    PDBbind105aa, >6FGL_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5mgm
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBromodomain adjacent to zinc finger domain protein 2A
Ligand Name7MZ
EC.Number E.C.-.-.-.-
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)Kd>500uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Eur J Med Chem Vol. 139: pp. 564-572
Ligand Properties
Formula C12H10N2O2
Molecular Weight 214.220
Exact Mass 214.074
No. of atoms 26
No. of bonds 27
Polar Surface Area 52.08
LOGP Value 1.75      (Computed with XLOGP3)
2.47      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9UIF9  
Entrez Gene IDNCBI Entrez Gene ID: 11176  
ASDInformation of known allosteric effects of PDB entries

 
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