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Related entries of code: 5nxy
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3r6uRCSB PDB    PDBbind284aa, >3R6U_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5nxy
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameOsmotically activated L-carnitine/choline ABC transporter substrate-binding protein OpuCC
Ligand Name1Y8
EC.Number E.C.-.-.-.-
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Ki=9uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Environ. Microbiol. Vol. 20: pp. 305-323
Ligand Properties
Formula C5H14AsO
Molecular Weight 165.086
Exact Mass 165.026
No. of atoms 21
No. of bonds 20
Polar Surface Area 20.23
LOGP Value 1.74      (Computed with XLOGP3)
1.32      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 1
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q45462  
Entrez Gene IDNCBI Entrez Gene ID: 938475  
ASDInformation of known allosteric effects of PDB entries
 
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