Browse entries in the PDBbind-CN Database

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Related entries of code: 5owf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1lafRCSB PDB    PDBbind238aa, >1LAF_1|Chain... at 99%
1lagRCSB PDB    PDBbind238aa, >1LAG_1|Chain... at 99%
1lahRCSB PDB    PDBbind238aa, >1LAH_1|Chain... at 99%
1lstRCSB PDB    PDBbind239aa, >1LST_1|Chain... at 99%
6mlpRCSB PDB    PDBbind238aa, >6MLP_1|Chain... at 99%
6mloRCSB PDB    PDBbind238aa, >6MLO_1|Chain... at 99%
6mlnRCSB PDB    PDBbind238aa, >6MLN_1|Chain... at 99%
6mljRCSB PDB    PDBbind237aa, >6MLJ_1|Chains... at 99%
6mliRCSB PDB    PDBbind238aa, >6MLI_1|Chain... at 99%
6mlgRCSB PDB    PDBbind238aa, >6MLG_1|Chain... at 99%
6mleRCSB PDB    PDBbind238aa, >6MLE_1|Chain... at 99%
6ml9RCSB PDB    PDBbind238aa, >6ML9_1|Chain... at 99%
6mlaRCSB PDB    PDBbind238aa, >6MLA_1|Chain... at 99%
6mkwRCSB PDB    PDBbind237aa, >6MKW_1|Chain... at 99%
6mkuRCSB PDB    PDBbind238aa, >6MKU_1|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1wdnRCSB PDB    PDBbindGLN
4g4pRCSB PDB    PDBbindGLN
4kqpRCSB PDB    PDBbindGLN
4lnfRCSB PDB    PDBbindGLN
4lnoRCSB PDB    PDBbindGLN
4zv2RCSB PDB    PDBbindGLN
5ltoRCSB PDB    PDBbindGLN

Entry Information
PDB ID5owf
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameLysine/arginine/ornithine-binding periplasmic protein L117K
Ligand NameGLN
EC.Number E.C.-.-.-.-
Resolution 1.91(Å)
Affinity (Kd/Ki/IC50)Kd=1.59uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Protein Sci. Vol. 27: pp. 957-968
Ligand Properties
Formula C5H11N2O3
Molecular Weight 147.152
Exact Mass 147.077
No. of atoms 21
No. of bonds 20
Polar Surface Area 108.03
LOGP Value -3.28      (Computed with XLOGP3)
-1.35      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P02911  
Entrez Gene IDNCBI Entrez Gene ID: 1253877  
ASDInformation of known allosteric effects of PDB entries

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