Browse entries in the PDBbind-CN Database

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Related entries of code: 5ujo
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1ylyRCSB PDB    PDBbind263aa, >1YLY_1|Chains... *
1ym1RCSB PDB    PDBbind263aa, >1YM1_1|Chains... at 100%
1ymsRCSB PDB    PDBbind263aa, >1YMS_1|Chains... at 100%
1ymxRCSB PDB    PDBbind263aa, >1YMX_1|Chains... at 100%
3g2yRCSB PDB    PDBbind263aa, >3G2Y_1|Chains... at 100%
3g2zRCSB PDB    PDBbind263aa, >3G2Z_1|Chains... at 100%
3g30RCSB PDB    PDBbind263aa, >3G30_1|Chain... at 100%
3g31RCSB PDB    PDBbind263aa, >3G31_1|Chains... at 100%
3g32RCSB PDB    PDBbind263aa, >3G32_1|Chains... at 100%
3g34RCSB PDB    PDBbind263aa, >3G34_1|Chains... at 100%
3g35RCSB PDB    PDBbind263aa, >3G35_1|Chains... at 100%
4ddsRCSB PDB    PDBbind263aa, >4DDS_1|Chains... at 99%
4ddyRCSB PDB    PDBbind263aa, >4DDY_1|Chains... at 99%
4de0RCSB PDB    PDBbind263aa, >4DE0_1|Chains... at 100%
4de1RCSB PDB    PDBbind263aa, >4DE1_1|Chains... at 100%
4de2RCSB PDB    PDBbind263aa, >4DE2_1|Chains... at 99%
4de3RCSB PDB    PDBbind263aa, >4DE3_1|Chains... at 99%
4lenRCSB PDB    PDBbind263aa, >4LEN_1|Chains... at 100%
6bt6RCSB PDB    PDBbind263aa, >6BT6_1|Chains... at 99%
6bu3RCSB PDB    PDBbind262aa, >6BU3_1|Chains... at 98%
6miaRCSB PDB    PDBbind263aa, >6MIA_1|Chains... at 99%
6md8RCSB PDB    PDBbind263aa, >6MD8_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5ujo
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBeta-lactamase
Ligand NameLSI
EC.Number E.C.-.-.-.-
Resolution 1.35(Å)
Affinity (Kd/Ki/IC50)IC50=44uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Organometallics Vol. 36: pp. 1673-1676
Ligand Properties
Formula C10H10Ru
Molecular Weight 231.256
Exact Mass 231.983
No. of atoms 21
No. of bonds 30
Polar Surface Area 0
LOGP Value 1.44      (Computed with XLOGP3)
2.04      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 0
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 0
No. of Rings: 10
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9L5C8  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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